fix GlucoseStatus calculation
This commit is contained in:
parent
88031b2322
commit
952a6fe509
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@ -1,178 +0,0 @@
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package info.nightscout.androidaps.data;
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import android.support.annotation.Nullable;
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import org.slf4j.Logger;
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import org.slf4j.LoggerFactory;
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import java.util.ArrayList;
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import java.util.List;
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import info.nightscout.androidaps.db.BgReading;
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import info.nightscout.androidaps.logging.L;
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import info.nightscout.androidaps.plugins.iob.iobCobCalculator.IobCobCalculatorPlugin;
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import info.nightscout.androidaps.utils.DateUtil;
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import info.nightscout.androidaps.utils.DecimalFormatter;
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import info.nightscout.androidaps.utils.Round;
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/**
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* Created by mike on 04.01.2017.
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*/
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public class GlucoseStatus {
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private static Logger log = LoggerFactory.getLogger(GlucoseStatus.class);
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public double glucose = 0d;
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public double delta = 0d;
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public double avgdelta = 0d;
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public double short_avgdelta = 0d;
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public double long_avgdelta = 0d;
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public long date = 0L;
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public String log() {
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return "Glucose: " + DecimalFormatter.to0Decimal(glucose) + " mg/dl " +
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"Delta: " + DecimalFormatter.to0Decimal(delta) + " mg/dl" +
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"Short avg. delta: " + " " + DecimalFormatter.to2Decimal(short_avgdelta) + " mg/dl " +
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"Long avg. delta: " + DecimalFormatter.to2Decimal(long_avgdelta) + " mg/dl";
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}
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public GlucoseStatus() {
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}
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public GlucoseStatus round() {
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this.glucose = Round.roundTo(this.glucose, 0.1);
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this.delta = Round.roundTo(this.delta, 0.01);
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this.avgdelta = Round.roundTo(this.avgdelta, 0.01);
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this.short_avgdelta = Round.roundTo(this.short_avgdelta, 0.01);
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this.long_avgdelta = Round.roundTo(this.long_avgdelta, 0.01);
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return this;
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}
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@Nullable
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public static GlucoseStatus getGlucoseStatusData() {
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return getGlucoseStatusData(false);
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}
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@Nullable
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public static GlucoseStatus getGlucoseStatusData(boolean allowOldData) {
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// load 45min
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//long fromtime = DateUtil.now() - 60 * 1000L * 45;
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//List<BgReading> data = MainApp.getDbHelper().getBgreadingsDataFromTime(fromtime, false);
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List<BgReading> data = IobCobCalculatorPlugin.getPlugin().getBgReadings();
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if (data == null) {
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if (L.isEnabled(L.GLUCOSE))
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log.debug("data=null");
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return null;
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}
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int sizeRecords = data.size();
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if (sizeRecords == 0) {
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if (L.isEnabled(L.GLUCOSE))
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log.debug("sizeRecords==0");
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return null;
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}
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if (data.get(0).date < DateUtil.now() - 7 * 60 * 1000L && !allowOldData) {
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if (L.isEnabled(L.GLUCOSE))
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log.debug("olddata");
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return null;
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}
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BgReading now = data.get(0);
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long now_date = now.date;
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double change;
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if (sizeRecords == 1) {
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GlucoseStatus status = new GlucoseStatus();
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status.glucose = now.value;
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status.short_avgdelta = 0d;
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status.delta = 0d;
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status.long_avgdelta = 0d;
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status.avgdelta = 0d; // for OpenAPS MA
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status.date = now_date;
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if (L.isEnabled(L.GLUCOSE))
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log.debug("sizeRecords==1");
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return status.round();
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}
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ArrayList<Double> now_value_list = new ArrayList<>();
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ArrayList<Double> last_deltas = new ArrayList<>();
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ArrayList<Double> short_deltas = new ArrayList<>();
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ArrayList<Double> long_deltas = new ArrayList<>();
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// Use the latest sgv value in the now calculations
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now_value_list.add(now.value);
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for (int i = 1; i < sizeRecords; i++) {
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if (data.get(i).value > 38) {
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BgReading then = data.get(i);
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long then_date = then.date;
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double avgdelta;
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long minutesago;
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minutesago = Math.round((now_date - then_date) / (1000d * 60));
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// multiply by 5 to get the same units as delta, i.e. mg/dL/5m
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change = now.value - then.value;
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avgdelta = change / minutesago * 5;
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if (L.isEnabled(L.GLUCOSE))
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log.debug(then.toString() + " minutesago=" + minutesago + " avgdelta=" + avgdelta);
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// use the average of all data points in the last 2.5m for all further "now" calculations
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if (0 < minutesago && minutesago < 2.5) {
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// Keep and average all values within the last 2.5 minutes
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now_value_list.add(then.value);
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now.value = average(now_value_list);
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// short_deltas are calculated from everything ~5-15 minutes ago
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} else if (2.5 < minutesago && minutesago < 17.5) {
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//console.error(minutesago, avgdelta);
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short_deltas.add(avgdelta);
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// last_deltas are calculated from everything ~5 minutes ago
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if (2.5 < minutesago && minutesago < 7.5) {
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last_deltas.add(avgdelta);
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}
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// long_deltas are calculated from everything ~20-40 minutes ago
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} else if (17.5 < minutesago && minutesago < 42.5) {
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long_deltas.add(avgdelta);
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} else {
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// Do not process any more records after >= 42.5 minutes
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break;
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}
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}
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}
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GlucoseStatus status = new GlucoseStatus();
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status.glucose = now.value;
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status.date = now_date;
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status.short_avgdelta = average(short_deltas);
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if (last_deltas.isEmpty()) {
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status.delta = status.short_avgdelta;
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} else {
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status.delta = average(last_deltas);
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}
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status.long_avgdelta = average(long_deltas);
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status.avgdelta = status.short_avgdelta; // for OpenAPS MA
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if (L.isEnabled(L.GLUCOSE))
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log.debug(status.log());
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return status.round();
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}
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public static double average(ArrayList<Double> array) {
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double sum = 0d;
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if (array.size() == 0)
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return 0d;
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for (Double value : array) {
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sum += value;
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}
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return sum / array.size();
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}
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}
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@ -12,6 +12,7 @@ import info.nightscout.androidaps.db.BgReading;
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import info.nightscout.androidaps.db.TempTarget;
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import info.nightscout.androidaps.interfaces.TreatmentsInterface;
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import info.nightscout.androidaps.plugins.iob.iobCobCalculator.CobInfo;
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import info.nightscout.androidaps.plugins.iob.iobCobCalculator.GlucoseStatus;
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import info.nightscout.androidaps.plugins.iob.iobCobCalculator.IobCobCalculatorPlugin;
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import info.nightscout.androidaps.plugins.aps.loop.LoopPlugin;
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import info.nightscout.androidaps.plugins.treatments.TreatmentsPlugin;
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@ -20,7 +20,7 @@ import java.lang.reflect.InvocationTargetException;
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import info.nightscout.androidaps.Constants;
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import info.nightscout.androidaps.MainApp;
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import info.nightscout.androidaps.R;
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import info.nightscout.androidaps.data.GlucoseStatus;
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import info.nightscout.androidaps.plugins.iob.iobCobCalculator.GlucoseStatus;
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import info.nightscout.androidaps.data.IobTotal;
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import info.nightscout.androidaps.data.MealData;
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import info.nightscout.androidaps.data.Profile;
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@ -6,7 +6,7 @@ import org.slf4j.LoggerFactory;
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import info.nightscout.androidaps.MainApp;
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import info.nightscout.androidaps.R;
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import info.nightscout.androidaps.data.GlucoseStatus;
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import info.nightscout.androidaps.plugins.iob.iobCobCalculator.GlucoseStatus;
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import info.nightscout.androidaps.data.IobTotal;
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import info.nightscout.androidaps.data.MealData;
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import info.nightscout.androidaps.data.Profile;
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@ -17,7 +17,7 @@ import java.lang.reflect.InvocationTargetException;
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import info.nightscout.androidaps.Constants;
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import info.nightscout.androidaps.R;
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import info.nightscout.androidaps.data.GlucoseStatus;
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import info.nightscout.androidaps.plugins.iob.iobCobCalculator.GlucoseStatus;
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import info.nightscout.androidaps.data.IobTotal;
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import info.nightscout.androidaps.data.MealData;
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import info.nightscout.androidaps.data.Profile;
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@ -6,7 +6,7 @@ import org.slf4j.LoggerFactory;
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import info.nightscout.androidaps.MainApp;
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import info.nightscout.androidaps.R;
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import info.nightscout.androidaps.data.GlucoseStatus;
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import info.nightscout.androidaps.plugins.iob.iobCobCalculator.GlucoseStatus;
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import info.nightscout.androidaps.data.IobTotal;
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import info.nightscout.androidaps.data.MealData;
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import info.nightscout.androidaps.data.Profile;
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@ -20,7 +20,7 @@ import java.lang.reflect.InvocationTargetException;
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import info.nightscout.androidaps.Constants;
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import info.nightscout.androidaps.MainApp;
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import info.nightscout.androidaps.R;
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import info.nightscout.androidaps.data.GlucoseStatus;
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import info.nightscout.androidaps.plugins.iob.iobCobCalculator.GlucoseStatus;
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import info.nightscout.androidaps.data.IobTotal;
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import info.nightscout.androidaps.data.MealData;
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import info.nightscout.androidaps.data.Profile;
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@ -6,7 +6,7 @@ import org.slf4j.LoggerFactory;
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import info.nightscout.androidaps.MainApp;
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import info.nightscout.androidaps.R;
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import info.nightscout.androidaps.data.GlucoseStatus;
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import info.nightscout.androidaps.plugins.iob.iobCobCalculator.GlucoseStatus;
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import info.nightscout.androidaps.data.IobTotal;
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import info.nightscout.androidaps.data.MealData;
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import info.nightscout.androidaps.data.Profile;
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@ -39,7 +39,7 @@ import java.util.List;
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import info.nightscout.androidaps.Constants;
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import info.nightscout.androidaps.MainApp;
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import info.nightscout.androidaps.R;
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import info.nightscout.androidaps.data.GlucoseStatus;
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import info.nightscout.androidaps.plugins.iob.iobCobCalculator.GlucoseStatus;
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import info.nightscout.androidaps.data.Profile;
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import info.nightscout.androidaps.data.ProfileStore;
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import info.nightscout.androidaps.db.BgReading;
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@ -56,7 +56,7 @@ import info.nightscout.androidaps.Constants;
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import info.nightscout.androidaps.MainApp;
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import info.nightscout.androidaps.R;
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import info.nightscout.androidaps.data.DetailedBolusInfo;
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import info.nightscout.androidaps.data.GlucoseStatus;
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import info.nightscout.androidaps.plugins.iob.iobCobCalculator.GlucoseStatus;
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import info.nightscout.androidaps.data.IobTotal;
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import info.nightscout.androidaps.data.Profile;
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import info.nightscout.androidaps.data.QuickWizardEntry;
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@ -18,7 +18,7 @@ import java.text.DecimalFormat;
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import info.nightscout.androidaps.Constants;
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import info.nightscout.androidaps.R;
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import info.nightscout.androidaps.data.GlucoseStatus;
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import info.nightscout.androidaps.plugins.iob.iobCobCalculator.GlucoseStatus;
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import info.nightscout.androidaps.data.Profile;
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import info.nightscout.androidaps.plugins.configBuilder.ProfileFunctions;
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import info.nightscout.androidaps.utils.NumberPicker;
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@ -20,7 +20,7 @@ import info.nightscout.androidaps.Constants;
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import info.nightscout.androidaps.MainActivity;
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import info.nightscout.androidaps.MainApp;
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import info.nightscout.androidaps.R;
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import info.nightscout.androidaps.data.GlucoseStatus;
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import info.nightscout.androidaps.plugins.iob.iobCobCalculator.GlucoseStatus;
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import info.nightscout.androidaps.data.IobTotal;
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import info.nightscout.androidaps.db.BgReading;
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import info.nightscout.androidaps.db.DatabaseHelper;
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@ -20,7 +20,7 @@ import info.nightscout.androidaps.Constants;
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import info.nightscout.androidaps.MainApp;
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import info.nightscout.androidaps.R;
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import info.nightscout.androidaps.data.DetailedBolusInfo;
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import info.nightscout.androidaps.data.GlucoseStatus;
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import info.nightscout.androidaps.plugins.iob.iobCobCalculator.GlucoseStatus;
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import info.nightscout.androidaps.data.IobTotal;
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import info.nightscout.androidaps.data.Profile;
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import info.nightscout.androidaps.data.ProfileStore;
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@ -32,17 +32,11 @@ import com.google.android.gms.wearable.PutDataRequest;
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import com.google.android.gms.wearable.Wearable;
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import com.google.android.gms.wearable.WearableListenerService;
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import org.slf4j.Logger;
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import org.slf4j.LoggerFactory;
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import java.util.ArrayList;
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import java.util.List;
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import info.nightscout.androidaps.Config;
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import info.nightscout.androidaps.Constants;
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import info.nightscout.androidaps.MainApp;
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import info.nightscout.androidaps.R;
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import info.nightscout.androidaps.data.GlucoseStatus;
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import info.nightscout.androidaps.plugins.iob.iobCobCalculator.GlucoseStatus;
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import info.nightscout.androidaps.data.IobTotal;
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import info.nightscout.androidaps.data.Profile;
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import info.nightscout.androidaps.db.BgReading;
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@ -55,15 +49,11 @@ import info.nightscout.androidaps.interfaces.PluginType;
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import info.nightscout.androidaps.interfaces.TreatmentsInterface;
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import info.nightscout.androidaps.plugins.aps.loop.LoopPlugin;
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import info.nightscout.androidaps.plugins.configBuilder.ConfigBuilderPlugin;
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import info.nightscout.androidaps.plugins.configBuilder.ProfileFunctions;
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import info.nightscout.androidaps.plugins.general.nsclient.data.NSDeviceStatus;
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import info.nightscout.androidaps.plugins.general.overview.OverviewPlugin;
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import info.nightscout.androidaps.plugins.treatments.TreatmentsPlugin;
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import info.nightscout.androidaps.plugins.general.wear.ActionStringHandler;
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import info.nightscout.androidaps.plugins.general.wear.WearPlugin;
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import info.nightscout.androidaps.plugins.iob.iobCobCalculator.IobCobCalculatorPlugin;
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import info.nightscout.androidaps.plugins.treatments.Treatment;
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import info.nightscout.androidaps.plugins.treatments.TreatmentsPlugin;
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import info.nightscout.androidaps.utils.DecimalFormatter;
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import info.nightscout.androidaps.utils.SP;
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import info.nightscout.androidaps.utils.SafeParse;
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@ -0,0 +1,180 @@
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package info.nightscout.androidaps.plugins.iob.iobCobCalculator;
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import android.support.annotation.Nullable;
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import org.slf4j.Logger;
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import org.slf4j.LoggerFactory;
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import java.util.ArrayList;
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import java.util.List;
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import info.nightscout.androidaps.db.BgReading;
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import info.nightscout.androidaps.logging.L;
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import info.nightscout.androidaps.utils.DateUtil;
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import info.nightscout.androidaps.utils.DecimalFormatter;
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import info.nightscout.androidaps.utils.Round;
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/**
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* Created by mike on 04.01.2017.
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*/
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public class GlucoseStatus {
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private static Logger log = LoggerFactory.getLogger(GlucoseStatus.class);
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public double glucose = 0d;
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public double delta = 0d;
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public double avgdelta = 0d;
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public double short_avgdelta = 0d;
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public double long_avgdelta = 0d;
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public long date = 0L;
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public String log() {
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return "Glucose: " + DecimalFormatter.to0Decimal(glucose) + " mg/dl " +
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"Delta: " + DecimalFormatter.to0Decimal(delta) + " mg/dl" +
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"Short avg. delta: " + " " + DecimalFormatter.to2Decimal(short_avgdelta) + " mg/dl " +
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"Long avg. delta: " + DecimalFormatter.to2Decimal(long_avgdelta) + " mg/dl";
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}
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public GlucoseStatus() {
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}
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public GlucoseStatus round() {
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this.glucose = Round.roundTo(this.glucose, 0.1);
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this.delta = Round.roundTo(this.delta, 0.01);
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this.avgdelta = Round.roundTo(this.avgdelta, 0.01);
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this.short_avgdelta = Round.roundTo(this.short_avgdelta, 0.01);
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this.long_avgdelta = Round.roundTo(this.long_avgdelta, 0.01);
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return this;
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}
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@Nullable
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public static GlucoseStatus getGlucoseStatusData() {
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return getGlucoseStatusData(false);
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}
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@Nullable
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public static GlucoseStatus getGlucoseStatusData(boolean allowOldData) {
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// load 45min
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//long fromtime = DateUtil.now() - 60 * 1000L * 45;
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//List<BgReading> data = MainApp.getDbHelper().getBgreadingsDataFromTime(fromtime, false);
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synchronized (IobCobCalculatorPlugin.getPlugin().dataLock) {
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List<BgReading> data = IobCobCalculatorPlugin.getPlugin().getBgReadings();
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if (data == null) {
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if (L.isEnabled(L.GLUCOSE))
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log.debug("data=null");
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return null;
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}
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int sizeRecords = data.size();
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if (sizeRecords == 0) {
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if (L.isEnabled(L.GLUCOSE))
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log.debug("sizeRecords==0");
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return null;
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}
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if (data.get(0).date < DateUtil.now() - 7 * 60 * 1000L && !allowOldData) {
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if (L.isEnabled(L.GLUCOSE))
|
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log.debug("olddata");
|
||||
return null;
|
||||
}
|
||||
|
||||
BgReading now = data.get(0);
|
||||
long now_date = now.date;
|
||||
double change;
|
||||
|
||||
if (sizeRecords == 1) {
|
||||
GlucoseStatus status = new GlucoseStatus();
|
||||
status.glucose = now.value;
|
||||
status.short_avgdelta = 0d;
|
||||
status.delta = 0d;
|
||||
status.long_avgdelta = 0d;
|
||||
status.avgdelta = 0d; // for OpenAPS MA
|
||||
status.date = now_date;
|
||||
if (L.isEnabled(L.GLUCOSE))
|
||||
log.debug("sizeRecords==1");
|
||||
return status.round();
|
||||
}
|
||||
|
||||
ArrayList<Double> now_value_list = new ArrayList<>();
|
||||
ArrayList<Double> last_deltas = new ArrayList<>();
|
||||
ArrayList<Double> short_deltas = new ArrayList<>();
|
||||
ArrayList<Double> long_deltas = new ArrayList<>();
|
||||
|
||||
// Use the latest sgv value in the now calculations
|
||||
now_value_list.add(now.value);
|
||||
|
||||
for (int i = 1; i < sizeRecords; i++) {
|
||||
if (data.get(i).value > 38) {
|
||||
BgReading then = data.get(i);
|
||||
long then_date = then.date;
|
||||
double avgdelta;
|
||||
long minutesago;
|
||||
|
||||
minutesago = Math.round((now_date - then_date) / (1000d * 60));
|
||||
// multiply by 5 to get the same units as delta, i.e. mg/dL/5m
|
||||
change = now.value - then.value;
|
||||
avgdelta = change / minutesago * 5;
|
||||
|
||||
if (L.isEnabled(L.GLUCOSE))
|
||||
log.debug(then.toString() + " minutesago=" + minutesago + " avgdelta=" + avgdelta);
|
||||
|
||||
// use the average of all data points in the last 2.5m for all further "now" calculations
|
||||
if (0 < minutesago && minutesago < 2.5) {
|
||||
// Keep and average all values within the last 2.5 minutes
|
||||
now_value_list.add(then.value);
|
||||
now.value = average(now_value_list);
|
||||
// short_deltas are calculated from everything ~5-15 minutes ago
|
||||
} else if (2.5 < minutesago && minutesago < 17.5) {
|
||||
//console.error(minutesago, avgdelta);
|
||||
short_deltas.add(avgdelta);
|
||||
// last_deltas are calculated from everything ~5 minutes ago
|
||||
if (2.5 < minutesago && minutesago < 7.5) {
|
||||
last_deltas.add(avgdelta);
|
||||
}
|
||||
// long_deltas are calculated from everything ~20-40 minutes ago
|
||||
} else if (17.5 < minutesago && minutesago < 42.5) {
|
||||
long_deltas.add(avgdelta);
|
||||
} else {
|
||||
// Do not process any more records after >= 42.5 minutes
|
||||
break;
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
GlucoseStatus status = new GlucoseStatus();
|
||||
status.glucose = now.value;
|
||||
status.date = now_date;
|
||||
|
||||
status.short_avgdelta = average(short_deltas);
|
||||
|
||||
if (last_deltas.isEmpty()) {
|
||||
status.delta = status.short_avgdelta;
|
||||
} else {
|
||||
status.delta = average(last_deltas);
|
||||
}
|
||||
|
||||
status.long_avgdelta = average(long_deltas);
|
||||
status.avgdelta = status.short_avgdelta; // for OpenAPS MA
|
||||
|
||||
if (L.isEnabled(L.GLUCOSE))
|
||||
log.debug(status.log());
|
||||
return status.round();
|
||||
}
|
||||
}
|
||||
|
||||
public static double average(ArrayList<Double> array) {
|
||||
double sum = 0d;
|
||||
|
||||
if (array.size() == 0)
|
||||
return 0d;
|
||||
|
||||
for (Double value : array) {
|
||||
sum += value;
|
||||
}
|
||||
return sum / array.size();
|
||||
}
|
||||
}
|
|
@ -3,7 +3,7 @@ package info.nightscout.androidaps.utils;
|
|||
import org.slf4j.Logger;
|
||||
import org.slf4j.LoggerFactory;
|
||||
|
||||
import info.nightscout.androidaps.data.GlucoseStatus;
|
||||
import info.nightscout.androidaps.plugins.iob.iobCobCalculator.GlucoseStatus;
|
||||
import info.nightscout.androidaps.data.IobTotal;
|
||||
import info.nightscout.androidaps.data.Profile;
|
||||
import info.nightscout.androidaps.db.TempTarget;
|
||||
|
|
|
@ -16,6 +16,7 @@ import java.util.List;
|
|||
import info.AAPSMocker;
|
||||
import info.nightscout.androidaps.MainApp;
|
||||
import info.nightscout.androidaps.db.BgReading;
|
||||
import info.nightscout.androidaps.plugins.iob.iobCobCalculator.GlucoseStatus;
|
||||
import info.nightscout.androidaps.plugins.iob.iobCobCalculator.IobCobCalculatorPlugin;
|
||||
import info.nightscout.androidaps.plugins.general.nsclient.data.NSSgv;
|
||||
import info.nightscout.androidaps.utils.DateUtil;
|
||||
|
|
|
@ -9,7 +9,7 @@ import org.powermock.modules.junit4.PowerMockRunner;
|
|||
|
||||
import info.AAPSMocker;
|
||||
import info.nightscout.androidaps.MainApp;
|
||||
import info.nightscout.androidaps.data.GlucoseStatus;
|
||||
import info.nightscout.androidaps.plugins.iob.iobCobCalculator.GlucoseStatus;
|
||||
import info.nightscout.androidaps.data.IobTotal;
|
||||
import info.nightscout.androidaps.data.Profile;
|
||||
import info.nightscout.androidaps.interfaces.PumpInterface;
|
||||
|
|
Loading…
Reference in a new issue